DNBSEQ-G400 paired end sequencing of SAMD00787354 - SRA

DRX538910: DNBSEQ-G400 paired end sequencing of SAMD00787354
1 DNBSEQ (DNBSEQ-G400) run: 13.9M spots, 4.2G bases, 2.7Gb downloads

Submitted by: Nagoya university

Study: Search for genes involved in anaerobic isethionic acid metabolism in the photosynthetic bacterium Rhodobacter capsulatus.

PRJDB17997 • DRP011616 • All experiments • All runs

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The photosynthetic bacterium Rhodobacter capsulatus does not lose its ability to metabolize isethionic acid even in strains lacking genes for known isethionic acid metabolizing enzymes, suggesting that there are unknown metabolic enzymes and metabolic pathways. In this project, RNAseq analysis was used to comprehensively search for genes whose expression is specifically induced under culture conditions in which isethionic acid is the sole sulfur source.

Sample: biological replicate-1

SAMD00787354 • DRS380958 • All experiments • All runs

Organism: Rhodobacter capsulatus SB 1003

Library:

Name: Ise/Sul_R.capsulatus

Instrument: DNBSEQ-G400

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: random primer by MGIEasy RNA Directional Library Prep Set

Runs: 1 run, 13.9M spots, 4.2G bases, 2.7Gb

Run	# of Spots	# of Bases	Size	Published
DRR555176	13,920,748	4.2G	2.7Gb	2024-05-27

ID:: 33034769

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